Alexej Abyzov | Gene Regulation Epigenetics | Best Researcher Award

Dr. Alexej Abyzov | Gene Regulation Epigenetics | Best Researcher Award

Dr. Alexej Abyzov , Mayo Clinic , United States

Dr. Alexej Abyzov is an Associate Professor of Biomedical Informatics at the Mayo College of Medicine and a consultant at the Mayo Clinic’s Department of Quantitative Health Sciences. He is also an adjunct professor at Yale University and a graduate faculty member at the University of Minnesota. Dr. Abyzov’s research focuses on computational biology and bioinformatics, particularly in understanding genomic variability, somatic mosaicism, and the genetic basis of neurodevelopmental disorders. He has made substantial contributions to the study of human genome structure and its impact on health. Dr. Abyzov has led numerous research projects funded by NIH and has published extensively in high-impact journals. He is a respected speaker, having presented at international conferences and workshops. Beyond his research, Dr. Abyzov is involved in mentorship and community service, contributing to education and outreach efforts in science and technology.

Publication Profile:

Google Scholar

Strengths for the Award:

Dr. Alexej Abyzov’s work exemplifies excellence in the field of Biomedical Informatics and Computational Biology. His remarkable research contributions span areas such as genetic variation, neurodevelopment, and the understanding of neuropsychiatric diseases. He has been an integral part of cutting-edge projects like investigating somatic mosaicism in schizophrenia and modeling autism in organoids. His ability to bridge the gap between computational techniques and biological applications is demonstrated in his extensive list of high-impact publications, many of which have been published in top-tier journals like Science and Nature. Furthermore, his leadership role in symposia and collaborations with renowned institutions such as Yale University and the University of Minnesota showcases his influence in the scientific community.

Areas for Improvement:

Although Dr. Abyzov has an impressive track record, expanding the outreach of his work into more interdisciplinary collaborations and ensuring greater engagement with clinical applications could enhance the direct societal impact of his findings. Additionally, increasing public-facing communication of his research could foster more public awareness and policy implications, given the importance of his work in understanding neurodevelopmental and psychiatric disorders

Education:

Dr. Alexej Abyzov holds a Ph.D. in Biomedical Informatics, which laid the foundation for his career in computational biology. He began his academic journey with a focus on bioinformatics, later earning a tenure-track faculty position in 2014 at Mayo College of Medicine. In 2020, he was promoted to Associate Professor in Biomedical Informatics. Dr. Abyzov is also an adjunct professor at Yale University’s Child Study Center, where he continues to collaborate on research projects involving neurodevelopmental disorders. Throughout his academic career, Dr. Abyzov has been involved in shaping educational curricula and mentoring students and researchers, providing opportunities for both hands-on research and professional development. He has served as a graduate faculty member at the University of Minnesota, emphasizing his broad academic influence. His educational background is complemented by ongoing work in the development of new bioinformatics tools and approaches for genomics research.

Experience:

Dr. Alexej Abyzov’s career has been marked by continuous growth and contributions in the field of biomedical informatics. He is currently an Associate Professor at Mayo College of Medicine and a Consultant in the Department of Quantitative Health Sciences at Mayo Clinic. Since 2016, he has also served as an adjunct professor at Yale University and has been a part of the Graduate Faculty at the University of Minnesota. His experience includes supervising summer interns, Ph.D. students, and post-doctoral fellows. Dr. Abyzov’s work in bioinformatics has helped lead groundbreaking studies on somatic mosaicism, genetic mutations, and neurodevelopmental disorders. He has actively participated in a number of international collaborations, including co-chairing a symposium at the Molecular Psychiatry Association and providing consulting services for personalized medicine projects. Through his diverse teaching and research roles, Dr. Abyzov has significantly advanced the field of computational biology and genomics.

Awards and Honors:

Dr. Alexej Abyzov has received numerous accolades throughout his career, reflecting his significant contributions to the field of biomedical informatics. He was elected as a member of the New York Academy of Sciences in 2008, a prestigious recognition for his early career achievements. In 2007, he became a member of The Honor Society of Phi Kappa Phi, acknowledging his academic excellence. Dr. Abyzov was also inducted into the International Society for Computational Biology (ISCB) in 2005, further solidifying his position as a leader in the field of bioinformatics. These recognitions underscore his dedication to advancing scientific knowledge, especially in genomics and computational biology. Dr. Abyzov’s honors serve as a testament to his ability to drive meaningful research, collaborate with other leading scientists, and contribute to educational initiatives, all while maintaining a strong commitment to community outreach and mentorship.

Research Focus:

Dr. Alexej Abyzov’s research focuses on bioinformatics, computational biology, and human genomics, with an emphasis on understanding the role of genetic and somatic mutations in health and disease. His work has greatly advanced the understanding of somatic mosaicism, particularly in neurodevelopmental disorders like autism spectrum disorder and Tourette syndrome. He is also deeply involved in exploring the molecular mechanisms behind genetic mutations in the brain, investigating how these mutations may contribute to mental health disorders such as schizophrenia. Dr. Abyzov is known for developing innovative tools and methodologies for analyzing large-scale genomic data, including CNVpytor and CRISPR-Cas editing. His research also explores transgenerational transmission of mutations, revealing insights into how genetic variations are passed down through generations. By combining computational biology with experimental data, Dr. Abyzov’s work provides critical insights into the genetic basis of complex diseases, offering potential pathways for personalized medicine and targeted treatments.

Publications Top Notes:

  1. Interneuron loss and microglia activation in Tourette disorder 🔬🧠 (2025)

  2. Transgenerational transmission of post-zygotic mutations in human germline 🔬👶🧬 (2024)

  3. Somatic mosaicism in schizophrenia reveals prenatal mutational processes 🧠🧬 (2024)

  4. Genome-wide analysis of copy number with CNVpytor in igv.js 💻📊 (2024)

  5. Resolving the 22q11.2 deletion with CTLR-Seq 🧬🔍 (2024)

  6. Characterization of enhancer activity using MPRA and forebrain organoids 🧬🔬 (2024)

  7. Genomic resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases 🧠🧬 (2023)

  8. Modeling idiopathic autism in forebrain organoids reveals imbalances in excitatory neurons 👶🧠 (2023)

  9. Clonally Selected Lines After CRISPR-Cas Editing Are Not Isogenic 🧬⚙️ (2023)

  10. Efficient reconstruction of cell lineage trees for cancer and cell ancestry 🧬🧪 (2023)

Conclusion:

Dr. Alexej Abyzov is an ideal candidate for the Research for Best Researcher Award due to his profound contributions to the understanding of genetic and somatic variation, his leadership in major collaborative research efforts, and his ongoing influence in shaping the field of Biomedical Informatics. His ongoing work and future potential make him a standout figure for this prestigious recognition.

 

 

Robert Crawford | Gene Regulation Epigenetics | Epigenetics in Cell Biology Award

Dr. Robert Crawford | Gene Regulation Epigenetics | Epigenetics in Cell Biology Award

Dr. Robert Crawford, biomodal , United Kingdom

Dr. Robert Crawford, MEng, DPhil (Oxon), is a distinguished multi-disciplinary scientist and engineer with over 13 years of experience in the life sciences. His expertise spans the development, integration, and verification of DNA sequencing technologies, with a strong focus on genomic and epigenomic applications. He currently serves as Associate Director of Collaborations and Applications at biomodal, where he leads scientific and informatics teams to drive innovation and strategic partnerships. Previously, he played a key role at Illumina in integrating whole-genome sequencing solutions for in vitro diagnostics. Dr. Crawford’s academic journey began at the University of Oxford, where he earned a DPhil in Condensed Matter Physics and contributed to the foundational IP of Oxford Nanoimaging. His research has led to multiple high-impact publications, patents, and conference presentations. Passionate about scientific discovery and translational research, he continues to shape the future of epigenetics and molecular diagnostics.

Publication Profile: 

Orcid

Strengths for the Award:

Expertise in Epigenetics & Genomics – Dr. Robert Crawford has extensive experience in genomic and epigenomic sequencing, particularly in integrating DNA modifications like 5-methylcytosine and 5-hydroxymethylcytosine as biomarkers. His recent publications in Nature Structural & Molecular Biology demonstrate his contributions to the field.

Industry & Academic Impact – His transition from academia to industry has resulted in high-impact research, patents, and product development. At biomodal, he leads teams working on sequencing applications relevant to cell biology and epigenetics.

Innovation & Translational Research – He co-invented a single-molecule microscope (now a spin-out, Oxford Nanoimaging), showcasing his ability to translate fundamental research into real-world applications.

Collaborative Leadership – His role at biomodal involves leading collaborations with academic and commercial partners, demonstrating his ability to foster research in epigenetics and molecular diagnostics.

Areas for Improvement:

🔹 Further Independent Research – While his collaborative research is significant, leading an independent research program in epigenetics would further strengthen his case for this award.
🔹 Expanded Focus on Cell Biology Applications – While his work heavily focuses on DNA modifications, a deeper exploration into how these modifications impact broader cellular mechanisms could enhance his profile.

Education:

Dr. Robert Crawford obtained his DPhil (Oxon) in Condensed Matter Physics from St John’s College, University of Oxford, where he investigated single-molecule DNA sensors and transcription factor dynamics. His research was conducted under the supervision of Prof. Achilles Kapanidis in the Gene Machines Group. Prior to his doctorate, he completed interdisciplinary training at Oxford’s Life Sciences Interface Doctoral Training Centre, covering computational biology, medical imaging, biophysics, and bioinformatics. His undergraduate education culminated in an MEng in a related field, equipping him with strong analytical and engineering skills. Dr. Crawford’s academic foundation has been instrumental in his contributions to DNA sequencing technologies, super-resolution imaging, and epigenetics. His work at Oxford also led to the invention of a compact single-molecule microscope, which later became the basis for the spin-out Oxford Nanoimaging. His rigorous scientific background enables him to bridge fundamental research and commercial biotechnology applications.

Experience:

Dr. Robert Crawford’s professional career has spanned academia and industry, with a focus on genomics, epigenetics, and molecular diagnostics. At biomodal, he serves as Associate Director of Collaborations and Applications, leading teams in commercial and academic partnerships, technology demonstrations, and strategic initiatives. Previously, he spent nearly a decade at Illumina, where he played a key role in integrating end-to-end in vitro diagnostic whole-genome sequencing solutions. His expertise in troubleshooting, large-scale data analysis, and verification test planning has contributed to the successful deployment of cutting-edge sequencing platforms. In academia, he was a Research Fellow at the University of Oxford, pioneering single-molecule imaging techniques and co-inventing a compact microscope for biosensing. This work laid the groundwork for Oxford Nanoimaging, now a leading biotech company. Dr. Crawford’s blend of research innovation and industry execution has made him a driving force in the advancement of sequencing technologies.

Awards and Honors:

Dr. Robert Crawford has received several prestigious awards and research grants in recognition of his contributions to life sciences and engineering. In 2013, he was awarded a Junior Research Fellowship at Linacre College, University of Oxford, supporting his groundbreaking work in single-molecule microscopy. His postdoctoral research attracted over £160,000 in funding, including a £120,000 DSTL grant from the UK Ministry of Defence, a £10,000 BBSRC Sparking Impact award, and an EPSRC PhD Plus Scholarship worth £24,000. Additionally, he secured BBSRC Follow-on Funding through the Pathfinder scheme (£10,000) to advance the commercialization of his research. His patented work on compact microscopy led to the founding of Oxford Nanoimaging, which has raised over $109.4 million in funding. Through these achievements, Dr. Crawford has demonstrated a consistent ability to translate high-impact research into real-world applications, making him a strong contender for the Research for Epigenetics in Cell Biology Award.

Research Focus:

Dr. Robert Crawford’s research centers on the intersection of genomics, epigenetics, and molecular diagnostics, with a particular emphasis on developing and optimizing sequencing technologies. His work at biomodal explores the synergistic role of DNA modifications, such as 5-methylcytosine and 5-hydroxymethylcytosine, as biomarkers for early cancer detection. His recent studies highlight the critical regulatory function of OGT in global DNA methylation and transposable element suppression, advancing the understanding of epigenomic stability. During his time at Oxford, he developed a single-molecule fluorescence microscope for studying intracellular transcription factors, leading to significant breakthroughs in live-cell imaging. His research has been widely published in top-tier journals and has contributed to the development of cutting-edge sequencing workflows. With a strong commitment to translational science, Dr. Crawford’s work continues to push the boundaries of epigenetic research, making impactful contributions to early disease detection and precision medicine.

Publications Top Notes:

📌 20255-methylcytosine and 5-hydroxymethylcytosine are synergistic biomarkers for early detection of colorectal cancer – Nat Struct Mol Biol
🧬 2025OGT is a key regulator of global DNA methylation – Nat Struct Mol Biol
🧬 2025OGT prevents DNA demethylation and suppresses transposable elements in heterochromatin – Nat Struct Mol Biol (Accepted)
🔬 2015Compact Microscope – WO 2015059682 A1 (Founding IP for Oxford Nanoimaging)
💡 2013Long Lived Intracellular Single-molecule Fluorescence Using Electroporated Molecules – Biophys. J.
🧬 2013Non-covalent Single Transcription Factor Encapsulation Inside a DNA Cage – Angew Chem.

Conclusion:

Dr. Robert Crawford is an outstanding candidate for the Research for Epigenetics in Cell Biology Award due to his extensive expertise in genomic and epigenomic sequencing, strong research track record, and ability to bridge fundamental science with commercial applications. With his leadership in sequencing technology development and impactful publications, he is well-positioned to make continued contributions to epigenetics and cell biology. 🚀